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Cluster: HRGMv2_2726_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2726_34 HRGMv2_2726_34_8 7281 8825 + 3.A.1.5.28
TC HRGMv2_2726_34 HRGMv2_2726_34_9 8901 9914 + 3.A.1.5.25
TC HRGMv2_2726_34 HRGMv2_2726_34_10 9907 10812 + 3.A.1.5.19
TC HRGMv2_2726_34 HRGMv2_2726_34_11 10809 11804 + 3.A.1.5.20
TC HRGMv2_2726_34 HRGMv2_2726_34_12 11801 12685 + 3.A.1.5.20
pfam HRGMv2_2726_34 HRGMv2_2726_34_13 13773 14069 - DUF1292
CAZyme HRGMv2_2726_34 HRGMv2_2726_34_14 14357 16918 + GT51
Gene ID: HRGMv2_2726_34_8
Type: TC
Location: 7281 - 8825 (+)
Gene ID: HRGMv2_2726_34_9
Type: TC
Location: 8901 - 9914 (+)
Gene ID: HRGMv2_2726_34_10
Type: TC
Location: 9907 - 10812 (+)
Gene ID: HRGMv2_2726_34_11
Type: TC
Location: 10809 - 11804 (+)
Gene ID: HRGMv2_2726_34_12
Type: TC
Location: 11801 - 12685 (+)
Gene ID: HRGMv2_2726_34_13
Type: pfam
Location: 13773 - 14069 (-)
Gene ID: HRGMv2_2726_34_14
Type: CAZyme
Location: 14357 - 16918 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2726_34_12 vegetarian > vegan 1.41944 0.00364

🧭 Explore Read Mapping of CGC

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