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Cluster: HRGMv2_2721_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2721_26 HRGMv2_2721_26_11 9292 9786 + 3.D.1.5.1
NULL(UNKNOWN) HRGMv2_2721_26 HRGMv2_2721_26_12 9811 10179 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2721_26 HRGMv2_2721_26_13 10193 11986 + 3.D.1.5.1
TC HRGMv2_2721_26 HRGMv2_2721_26_14 12008 14851 + 3.D.1.9.2
TC HRGMv2_2721_26 HRGMv2_2721_26_15 14938 15606 + 1.A.16.5.1
NULL(UNKNOWN) HRGMv2_2721_26 HRGMv2_2721_26_16 15666 16346 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2721_26 HRGMv2_2721_26_17 16613 18703 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2721_26 HRGMv2_2721_26_18 18961 20541 + 3.A.1.2.19
TC HRGMv2_2721_26 HRGMv2_2721_26_19 20558 21577 + 3.A.1.2.15
TC HRGMv2_2721_26 HRGMv2_2721_26_20 21562 22563 + 3.A.1.2.8
TC HRGMv2_2721_26 HRGMv2_2721_26_21 22649 23788 + 3.A.1.2.25
pfam HRGMv2_2721_26 HRGMv2_2721_26_22 23967 24515 + PhdYeFM_antitox
TF HRGMv2_2721_26 HRGMv2_2721_26_23 24886 25092 + HTH_3
CAZyme HRGMv2_2721_26 HRGMv2_2721_26_24 25178 26209 - GH25
TC HRGMv2_2721_26 HRGMv2_2721_26_25 26206 26430 - 1.E.18.1.3
Gene ID: HRGMv2_2721_26_11
Type: TC
Location: 9292 - 9786 (+)
Gene ID: HRGMv2_2721_26_12
Type:
Location: 9811 - 10179 (+)
Gene ID: HRGMv2_2721_26_13
Type: TC
Location: 10193 - 11986 (+)
Gene ID: HRGMv2_2721_26_14
Type: TC
Location: 12008 - 14851 (+)
Gene ID: HRGMv2_2721_26_15
Type: TC
Location: 14938 - 15606 (+)
Gene ID: HRGMv2_2721_26_16
Type:
Location: 15666 - 16346 (-)
Gene ID: HRGMv2_2721_26_17
Type:
Location: 16613 - 18703 (+)
Gene ID: HRGMv2_2721_26_18
Type: TC
Location: 18961 - 20541 (+)
Gene ID: HRGMv2_2721_26_19
Type: TC
Location: 20558 - 21577 (+)
Gene ID: HRGMv2_2721_26_20
Type: TC
Location: 21562 - 22563 (+)
Gene ID: HRGMv2_2721_26_21
Type: TC
Location: 22649 - 23788 (+)
Gene ID: HRGMv2_2721_26_22
Type: pfam
Location: 23967 - 24515 (+)
Gene ID: HRGMv2_2721_26_23
Type: TF
Location: 24886 - 25092 (+)
Gene ID: HRGMv2_2721_26_24
Type: CAZyme
Location: 25178 - 26209 (-)
Gene ID: HRGMv2_2721_26_25
Type: TC
Location: 26206 - 26430 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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