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Cluster: HRGMv2_2721_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2721_17 HRGMv2_2721_17_3 5344 6474 - 9.B.18.2.1
TC HRGMv2_2721_17 HRGMv2_2721_17_4 6475 7932 - 2.A.66.2.16
CAZyme HRGMv2_2721_17 HRGMv2_2721_17_5 7920 9197 - GT4
NULL(UNKNOWN) HRGMv2_2721_17 HRGMv2_2721_17_6 9194 10600 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2721_17 HRGMv2_2721_17_7 10597 11721 - GT4
CAZyme HRGMv2_2721_17 HRGMv2_2721_17_8 11718 12560 - GT2
CAZyme HRGMv2_2721_17 HRGMv2_2721_17_9 12520 13788 - GT4
pfam HRGMv2_2721_17 HRGMv2_2721_17_10 13785 14549 - CpsB_CapC
TC HRGMv2_2721_17 HRGMv2_2721_17_11 14577 15308 - 8.A.3.3.2
Gene ID: HRGMv2_2721_17_3
Type: TC
Location: 5344 - 6474 (-)
Gene ID: HRGMv2_2721_17_4
Type: TC
Location: 6475 - 7932 (-)
Gene ID: HRGMv2_2721_17_5
Type: CAZyme
Location: 7920 - 9197 (-)
Gene ID: HRGMv2_2721_17_6
Type:
Location: 9194 - 10600 (-)
Gene ID: HRGMv2_2721_17_7
Type: CAZyme
Location: 10597 - 11721 (-)
Gene ID: HRGMv2_2721_17_8
Type: CAZyme
Location: 11718 - 12560 (-)
Gene ID: HRGMv2_2721_17_9
Type: CAZyme
Location: 12520 - 13788 (-)
Gene ID: HRGMv2_2721_17_10
Type: pfam
Location: 13785 - 14549 (-)
Gene ID: HRGMv2_2721_17_11
Type: TC
Location: 14577 - 15308 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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