Cluster: HRGMv2_2721_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2721
- CGC Family ID: CGCFAM_01640
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2721_14 | HRGMv2_2721_14_7 | 6309 | 7163 | - | 2.A.115.1.5 |
| NULL(UNKNOWN) | HRGMv2_2721_14 | HRGMv2_2721_14_8 | 7331 | 7477 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_2721_14 | HRGMv2_2721_14_9 | 7556 | 8197 | - | 0045030 |
| CAZyme | HRGMv2_2721_14 | HRGMv2_2721_14_10 | 8260 | 9063 | - | CE4 |
| TC | HRGMv2_2721_14 | HRGMv2_2721_14_11 | 9160 | 10335 | - | 2.A.4.7.4 |
Gene ID: HRGMv2_2721_14_7
Type: TC
Location: 6309 - 7163 (-)
Type: TC
Location: 6309 - 7163 (-)
Gene ID: HRGMv2_2721_14_8
Type:
Location: 7331 - 7477 (-)
Type:
Location: 7331 - 7477 (-)
Gene ID: HRGMv2_2721_14_9
Type: TF
Location: 7556 - 8197 (-)
Type: TF
Location: 7556 - 8197 (-)
Gene ID: HRGMv2_2721_14_10
Type: CAZyme
Location: 8260 - 9063 (-)
Type: CAZyme
Location: 8260 - 9063 (-)
Gene ID: HRGMv2_2721_14_11
Type: TC
Location: 9160 - 10335 (-)
Type: TC
Location: 9160 - 10335 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Species
HGM13006 sp900757695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2721_14_8 | vegetarian > vegan | 3.02736 | 0.01882 |