Cluster: HRGMv2_2721_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2721
- CGC Family ID: CGCFAM_00005
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2721_9 | HRGMv2_2721_9_88 | 91324 | 91986 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_2721_9 | HRGMv2_2721_9_89 | 92023 | 92781 | + | GT2 |
| CAZyme | HRGMv2_2721_9 | HRGMv2_2721_9_90 | 92792 | 93751 | + | GT2 |
| CAZyme | HRGMv2_2721_9 | HRGMv2_2721_9_91 | 93774 | 94877 | + | GT4 |
| pfam | HRGMv2_2721_9 | HRGMv2_2721_9_92 | 94896 | 96332 | + | Wzy_C |
| CAZyme | HRGMv2_2721_9 | HRGMv2_2721_9_93 | 96352 | 97350 | + | GT2 |
Gene ID: HRGMv2_2721_9_88
Type: TC
Location: 91324 - 91986 (+)
Type: TC
Location: 91324 - 91986 (+)
Gene ID: HRGMv2_2721_9_89
Type: CAZyme
Location: 92023 - 92781 (+)
Type: CAZyme
Location: 92023 - 92781 (+)
Gene ID: HRGMv2_2721_9_90
Type: CAZyme
Location: 92792 - 93751 (+)
Type: CAZyme
Location: 92792 - 93751 (+)
Gene ID: HRGMv2_2721_9_91
Type: CAZyme
Location: 93774 - 94877 (+)
Type: CAZyme
Location: 93774 - 94877 (+)
Gene ID: HRGMv2_2721_9_92
Type: pfam
Location: 94896 - 96332 (+)
Type: pfam
Location: 94896 - 96332 (+)
Gene ID: HRGMv2_2721_9_93
Type: CAZyme
Location: 96352 - 97350 (+)
Type: CAZyme
Location: 96352 - 97350 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Species
HGM13006 sp900757695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.