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Cluster: HRGMv2_2721_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2721_8 HRGMv2_2721_8_38 44798 47356 - GH3
STP HRGMv2_2721_8 HRGMv2_2721_8_39 47500 47928 - CBS | CBS
STP HRGMv2_2721_8 HRGMv2_2721_8_40 48053 49336 - Aminotran_1_2
TC HRGMv2_2721_8 HRGMv2_2721_8_41 50000 50659 + 3.A.1.3.10
TC HRGMv2_2721_8 HRGMv2_2721_8_42 50640 51320 + 3.A.1.3.8
TC HRGMv2_2721_8 HRGMv2_2721_8_43 51320 52072 + 3.A.1.3.14
STP HRGMv2_2721_8 HRGMv2_2721_8_44 52559 53155 + SBP_bac_3
pfam HRGMv2_2721_8 HRGMv2_2721_8_45 53230 53913 - Hydrolase | Hydrolase_like | HAD_2
TC HRGMv2_2721_8 HRGMv2_2721_8_46 53894 55303 - 2.A.66.1.33
Gene ID: HRGMv2_2721_8_38
Type: CAZyme
Location: 44798 - 47356 (-)
Gene ID: HRGMv2_2721_8_39
Type: STP
Location: 47500 - 47928 (-)
Gene ID: HRGMv2_2721_8_40
Type: STP
Location: 48053 - 49336 (-)
Gene ID: HRGMv2_2721_8_41
Type: TC
Location: 50000 - 50659 (+)
Gene ID: HRGMv2_2721_8_42
Type: TC
Location: 50640 - 51320 (+)
Gene ID: HRGMv2_2721_8_43
Type: TC
Location: 51320 - 52072 (+)
Gene ID: HRGMv2_2721_8_44
Type: STP
Location: 52559 - 53155 (+)
Gene ID: HRGMv2_2721_8_45
Type: pfam
Location: 53230 - 53913 (-)
Gene ID: HRGMv2_2721_8_46
Type: TC
Location: 53894 - 55303 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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