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Cluster: HRGMv2_2721_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2721_1 HRGMv2_2721_1_109 105096 107618 + GT51
pfam HRGMv2_2721_1 HRGMv2_2721_1_110 107637 108503 + Methyltransf_15 | Methyltrans_SAM
TC HRGMv2_2721_1 HRGMv2_2721_1_111 108509 109360 + 3.A.1.26.7
TC HRGMv2_2721_1 HRGMv2_2721_1_112 109436 110302 + 3.A.1.26.9
TC HRGMv2_2721_1 HRGMv2_2721_1_113 110296 111099 + 3.A.1.25.4
pfam HRGMv2_2721_1 HRGMv2_2721_1_114 111112 111876 + PseudoU_synth_1 | PseudoU_synth_1
NULL(UNKNOWN) HRGMv2_2721_1 HRGMv2_2721_1_115 111866 112957 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2721_1 HRGMv2_2721_1_116 113017 115308 + 3.A.9.1.2
Gene ID: HRGMv2_2721_1_109
Type: CAZyme
Location: 105096 - 107618 (+)
Gene ID: HRGMv2_2721_1_110
Type: pfam
Location: 107637 - 108503 (+)
Gene ID: HRGMv2_2721_1_111
Type: TC
Location: 108509 - 109360 (+)
Gene ID: HRGMv2_2721_1_112
Type: TC
Location: 109436 - 110302 (+)
Gene ID: HRGMv2_2721_1_113
Type: TC
Location: 110296 - 111099 (+)
Gene ID: HRGMv2_2721_1_114
Type: pfam
Location: 111112 - 111876 (+)
Gene ID: HRGMv2_2721_1_115
Type:
Location: 111866 - 112957 (+)
Gene ID: HRGMv2_2721_1_116
Type: TC
Location: 113017 - 115308 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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