Cluster: HRGMv2_2717_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2717
- CGC Family ID: CGCFAM_07520
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2717_10 | HRGMv2_2717_10_9 | 7860 | 9038 | - | 3.A.1.17.3 |
| TC | HRGMv2_2717_10 | HRGMv2_2717_10_10 | 9359 | 10138 | - | 3.A.1.16.1 |
| pfam | HRGMv2_2717_10 | HRGMv2_2717_10_11 | 10132 | 11079 | - | BPD_transp_1 |
| pfam | HRGMv2_2717_10 | HRGMv2_2717_10_12 | 11577 | 12131 | + | ECF-ribofla_trS | ECF_trnsprt |
| CAZyme | HRGMv2_2717_10 | HRGMv2_2717_10_13 | 12250 | 14001 | - | GH13_9 |
Gene ID: HRGMv2_2717_10_9
Type: TC
Location: 7860 - 9038 (-)
Type: TC
Location: 7860 - 9038 (-)
Gene ID: HRGMv2_2717_10_10
Type: TC
Location: 9359 - 10138 (-)
Type: TC
Location: 9359 - 10138 (-)
Gene ID: HRGMv2_2717_10_11
Type: pfam
Location: 10132 - 11079 (-)
Type: pfam
Location: 10132 - 11079 (-)
Gene ID: HRGMv2_2717_10_12
Type: pfam
Location: 11577 - 12131 (+)
Type: pfam
Location: 11577 - 12131 (+)
Gene ID: HRGMv2_2717_10_13
Type: CAZyme
Location: 12250 - 14001 (-)
Type: CAZyme
Location: 12250 - 14001 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Agathobaculum
Species
Agathobaculum hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2717_10_12 | vegetarian > omnivore | 1.68447 | 0.00629 |