Cluster: HRGMv2_2717_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2717
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2717_6 | HRGMv2_2717_6_98 | 114443 | 115357 | + | 3.A.1.1.17 |
| TC | HRGMv2_2717_6 | HRGMv2_2717_6_99 | 115374 | 116216 | + | 3.A.1.1.41 |
| CAZyme | HRGMv2_2717_6 | HRGMv2_2717_6_100 | 116229 | 118343 | + | GH36 |
| TC | HRGMv2_2717_6 | HRGMv2_2717_6_101 | 118358 | 119473 | + | 3.A.1.1.22 |
Gene ID: HRGMv2_2717_6_98
Type: TC
Location: 114443 - 115357 (+)
Type: TC
Location: 114443 - 115357 (+)
Gene ID: HRGMv2_2717_6_99
Type: TC
Location: 115374 - 116216 (+)
Type: TC
Location: 115374 - 116216 (+)
Gene ID: HRGMv2_2717_6_100
Type: CAZyme
Location: 116229 - 118343 (+)
Type: CAZyme
Location: 116229 - 118343 (+)
Gene ID: HRGMv2_2717_6_101
Type: TC
Location: 118358 - 119473 (+)
Type: TC
Location: 118358 - 119473 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Agathobaculum
Species
Agathobaculum hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2717_6_99 | vegetarian > vegan | 1.58565 | 0.01260 |
| HRGMv2_2717_6_100 | vegetarian > vegan | 1.71662 | 0.01260 |