Cluster: HRGMv2_2717_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2717
- CGC Family ID: CGCFAM_07519
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2717_23 | HRGMv2_2717_23_23 | 23676 | 25271 | - | 9.B.160.1.10 |
| NULL(UNKNOWN) | HRGMv2_2717_23 | HRGMv2_2717_23_24 | 25444 | 25587 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2717_23 | HRGMv2_2717_23_25 | 25589 | 27352 | - | Cu_amine_oxidN1 |
| CAZyme | HRGMv2_2717_23 | HRGMv2_2717_23_26 | 27518 | 28336 | + | CE4 |
| pfam | HRGMv2_2717_23 | HRGMv2_2717_23_27 | 28344 | 28667 | - | BofC_C |
| CAZyme | HRGMv2_2717_23 | HRGMv2_2717_23_28 | 29020 | 31410 | + | GT51 |
Gene ID: HRGMv2_2717_23_23
Type: TC
Location: 23676 - 25271 (-)
Type: TC
Location: 23676 - 25271 (-)
Gene ID: HRGMv2_2717_23_24
Type:
Location: 25444 - 25587 (-)
Type:
Location: 25444 - 25587 (-)
Gene ID: HRGMv2_2717_23_25
Type: pfam
Location: 25589 - 27352 (-)
Type: pfam
Location: 25589 - 27352 (-)
Gene ID: HRGMv2_2717_23_26
Type: CAZyme
Location: 27518 - 28336 (+)
Type: CAZyme
Location: 27518 - 28336 (+)
Gene ID: HRGMv2_2717_23_27
Type: pfam
Location: 28344 - 28667 (-)
Type: pfam
Location: 28344 - 28667 (-)
Gene ID: HRGMv2_2717_23_28
Type: CAZyme
Location: 29020 - 31410 (+)
Type: CAZyme
Location: 29020 - 31410 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Agathobaculum
Species
Agathobaculum hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2717_23_24 | vegetarian > omnivore | 1.41050 | 0.00629 |
| HRGMv2_2717_23_25 | vegetarian > omnivore | 1.68022 | 0.00629 |
| HRGMv2_2717_23_27 | vegetarian > omnivore | 2.14328 | 0.00629 |
| HRGMv2_2717_23_27 | vegetarian > vegan | 1.04160 | 0.01260 |