Cluster: HRGMv2_2717_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2717
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2717_15 | HRGMv2_2717_15_17 | 16884 | 18020 | - | GT28 |
| TC | HRGMv2_2717_15 | HRGMv2_2717_15_18 | 18194 | 19462 | - | 2.A.103.1.3 |
| TC | HRGMv2_2717_15 | HRGMv2_2717_15_19 | 19487 | 20461 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_2717_15_17
Type: CAZyme
Location: 16884 - 18020 (-)
Type: CAZyme
Location: 16884 - 18020 (-)
Gene ID: HRGMv2_2717_15_18
Type: TC
Location: 18194 - 19462 (-)
Type: TC
Location: 18194 - 19462 (-)
Gene ID: HRGMv2_2717_15_19
Type: TC
Location: 19487 - 20461 (-)
Type: TC
Location: 19487 - 20461 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Agathobaculum
Species
Agathobaculum hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2717_15_18 | vegetarian > omnivore | 1.44006 | 0.00629 |