Cluster: HRGMv2_2717_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2717
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2717_13 | HRGMv2_2717_13_41 | 43279 | 45642 | + | 2.A.6.4.2 |
| pfam | HRGMv2_2717_13 | HRGMv2_2717_13_42 | 45951 | 46406 | + | ATP-cone | Zn_ribbon_NrdR |
| CAZyme | HRGMv2_2717_13 | HRGMv2_2717_13_43 | 46530 | 48761 | + | GT4 |
| CAZyme | HRGMv2_2717_13 | HRGMv2_2717_13_44 | 48819 | 50006 | + | GT4 |
Gene ID: HRGMv2_2717_13_41
Type: TC
Location: 43279 - 45642 (+)
Type: TC
Location: 43279 - 45642 (+)
Gene ID: HRGMv2_2717_13_42
Type: pfam
Location: 45951 - 46406 (+)
Type: pfam
Location: 45951 - 46406 (+)
Gene ID: HRGMv2_2717_13_43
Type: CAZyme
Location: 46530 - 48761 (+)
Type: CAZyme
Location: 46530 - 48761 (+)
Gene ID: HRGMv2_2717_13_44
Type: CAZyme
Location: 48819 - 50006 (+)
Type: CAZyme
Location: 48819 - 50006 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Agathobaculum
Species
Agathobaculum hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2717_13_42 | vegetarian > omnivore | 1.20831 | 0.00629 |