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Cluster: HRGMv2_2714_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2714_1 HRGMv2_2714_1_696 768443 771085 + 3.A.3.2.21
CAZyme HRGMv2_2714_1 HRGMv2_2714_1_697 771141 772004 + CE4
TC HRGMv2_2714_1 HRGMv2_2714_1_698 772137 772895 + 3.A.1.17.8
TC HRGMv2_2714_1 HRGMv2_2714_1_699 772888 773703 + 3.A.1.17.3
pfam HRGMv2_2714_1 HRGMv2_2714_1_700 773700 774683 + NMT1 | NMT1_2
TC HRGMv2_2714_1 HRGMv2_2714_1_701 774749 775600 - 3.A.1.24.5
TC HRGMv2_2714_1 HRGMv2_2714_1_702 775744 776421 - 3.A.1.24.5
TC HRGMv2_2714_1 HRGMv2_2714_1_703 776426 777418 - 3.A.1.24.2
Gene ID: HRGMv2_2714_1_696
Type: TC
Location: 768443 - 771085 (+)
Gene ID: HRGMv2_2714_1_697
Type: CAZyme
Location: 771141 - 772004 (+)
Gene ID: HRGMv2_2714_1_698
Type: TC
Location: 772137 - 772895 (+)
Gene ID: HRGMv2_2714_1_699
Type: TC
Location: 772888 - 773703 (+)
Gene ID: HRGMv2_2714_1_700
Type: pfam
Location: 773700 - 774683 (+)
Gene ID: HRGMv2_2714_1_701
Type: TC
Location: 774749 - 775600 (-)
Gene ID: HRGMv2_2714_1_702
Type: TC
Location: 775744 - 776421 (-)
Gene ID: HRGMv2_2714_1_703
Type: TC
Location: 776426 - 777418 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Oscillospiraceae
→
Genus
CAG-103
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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