Cluster: HRGMv2_2714_CGC12
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2714
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2714_1 | HRGMv2_2714_1_1658 | 1811328 | 1812101 | - | 3.A.1.3.14 |
| TC | HRGMv2_2714_1 | HRGMv2_2714_1_1659 | 1812114 | 1812761 | - | 3.A.1.3.20 |
| TC | HRGMv2_2714_1 | HRGMv2_2714_1_1660 | 1812840 | 1813661 | - | 3.A.1.3.10 |
| STP | HRGMv2_2714_1 | HRGMv2_2714_1_1661 | 1813898 | 1815775 | + | Pyr_redox_2 |
| TF | HRGMv2_2714_1 | HRGMv2_2714_1_1662 | 1815919 | 1816308 | + | GntR |
| TC | HRGMv2_2714_1 | HRGMv2_2714_1_1663 | 1816301 | 1817194 | + | 3.A.1.126.1 |
| NULL(UNKNOWN) | HRGMv2_2714_1 | HRGMv2_2714_1_1664 | 1817169 | 1819040 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2714_1 | HRGMv2_2714_1_1665 | 1819240 | 1820796 | + | 9.B.160.1.10 |
| TC | HRGMv2_2714_1 | HRGMv2_2714_1_1666 | 1821217 | 1822668 | - | 2.A.22.5.3 |
| STP | HRGMv2_2714_1 | HRGMv2_2714_1_1667 | 1823111 | 1823665 | + | Pribosyltran |
| CAZyme | HRGMv2_2714_1 | HRGMv2_2714_1_1668 | 1823737 | 1824546 | + | GT8 |
Gene ID: HRGMv2_2714_1_1658
Type: TC
Location: 1811328 - 1812101 (-)
Type: TC
Location: 1811328 - 1812101 (-)
Gene ID: HRGMv2_2714_1_1659
Type: TC
Location: 1812114 - 1812761 (-)
Type: TC
Location: 1812114 - 1812761 (-)
Gene ID: HRGMv2_2714_1_1660
Type: TC
Location: 1812840 - 1813661 (-)
Type: TC
Location: 1812840 - 1813661 (-)
Gene ID: HRGMv2_2714_1_1661
Type: STP
Location: 1813898 - 1815775 (+)
Type: STP
Location: 1813898 - 1815775 (+)
Gene ID: HRGMv2_2714_1_1662
Type: TF
Location: 1815919 - 1816308 (+)
Type: TF
Location: 1815919 - 1816308 (+)
Gene ID: HRGMv2_2714_1_1663
Type: TC
Location: 1816301 - 1817194 (+)
Type: TC
Location: 1816301 - 1817194 (+)
Gene ID: HRGMv2_2714_1_1664
Type:
Location: 1817169 - 1819040 (+)
Type:
Location: 1817169 - 1819040 (+)
Gene ID: HRGMv2_2714_1_1665
Type: TC
Location: 1819240 - 1820796 (+)
Type: TC
Location: 1819240 - 1820796 (+)
Gene ID: HRGMv2_2714_1_1666
Type: TC
Location: 1821217 - 1822668 (-)
Type: TC
Location: 1821217 - 1822668 (-)
Gene ID: HRGMv2_2714_1_1667
Type: STP
Location: 1823111 - 1823665 (+)
Type: STP
Location: 1823111 - 1823665 (+)
Gene ID: HRGMv2_2714_1_1668
Type: CAZyme
Location: 1823737 - 1824546 (+)
Type: CAZyme
Location: 1823737 - 1824546 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.