Cluster: HRGMv2_2714_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2714
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2714_1 | HRGMv2_2714_1_1381 | 1499335 | 1501230 | + | CBM48 | GH13_9 |
| CAZyme | HRGMv2_2714_1 | HRGMv2_2714_1_1382 | 1501244 | 1504729 | + | GH13_39 | GT5 |
| pfam | HRGMv2_2714_1 | HRGMv2_2714_1_1383 | 1504713 | 1506023 | + | Patatin |
| TC | HRGMv2_2714_1 | HRGMv2_2714_1_1384 | 1506224 | 1507000 | + | 2.A.5.5.2 |
Gene ID: HRGMv2_2714_1_1381
Type: CAZyme
Location: 1499335 - 1501230 (+)
Type: CAZyme
Location: 1499335 - 1501230 (+)
Gene ID: HRGMv2_2714_1_1382
Type: CAZyme
Location: 1501244 - 1504729 (+)
Type: CAZyme
Location: 1501244 - 1504729 (+)
Gene ID: HRGMv2_2714_1_1383
Type: pfam
Location: 1504713 - 1506023 (+)
Type: pfam
Location: 1504713 - 1506023 (+)
Gene ID: HRGMv2_2714_1_1384
Type: TC
Location: 1506224 - 1507000 (+)
Type: TC
Location: 1506224 - 1507000 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.