Cluster: HRGMv2_2714_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2714
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2714_1 | HRGMv2_2714_1_410 | 456313 | 458013 | - | GH2 |
| TC | HRGMv2_2714_1 | HRGMv2_2714_1_411 | 458322 | 459677 | + | 3.D.6.1.2 |
| TC | HRGMv2_2714_1 | HRGMv2_2714_1_412 | 459674 | 460732 | + | 3.D.6.1.2 |
| TC | HRGMv2_2714_1 | HRGMv2_2714_1_413 | 460725 | 461297 | + | 3.D.6.1.3 |
| TC | HRGMv2_2714_1 | HRGMv2_2714_1_414 | 461311 | 462000 | + | 3.D.6.1.2 |
| TC | HRGMv2_2714_1 | HRGMv2_2714_1_415 | 462002 | 462589 | + | 3.D.6.1.2 |
| TC | HRGMv2_2714_1 | HRGMv2_2714_1_416 | 462603 | 463415 | + | 3.D.6.1.2 |
Gene ID: HRGMv2_2714_1_410
Type: CAZyme
Location: 456313 - 458013 (-)
Type: CAZyme
Location: 456313 - 458013 (-)
Gene ID: HRGMv2_2714_1_411
Type: TC
Location: 458322 - 459677 (+)
Type: TC
Location: 458322 - 459677 (+)
Gene ID: HRGMv2_2714_1_412
Type: TC
Location: 459674 - 460732 (+)
Type: TC
Location: 459674 - 460732 (+)
Gene ID: HRGMv2_2714_1_413
Type: TC
Location: 460725 - 461297 (+)
Type: TC
Location: 460725 - 461297 (+)
Gene ID: HRGMv2_2714_1_414
Type: TC
Location: 461311 - 462000 (+)
Type: TC
Location: 461311 - 462000 (+)
Gene ID: HRGMv2_2714_1_415
Type: TC
Location: 462002 - 462589 (+)
Type: TC
Location: 462002 - 462589 (+)
Gene ID: HRGMv2_2714_1_416
Type: TC
Location: 462603 - 463415 (+)
Type: TC
Location: 462603 - 463415 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.