Cluster: HRGMv2_2711_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2711
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2711_1 | HRGMv2_2711_1_884 | 910625 | 911833 | - | GH3 |
| TC | HRGMv2_2711_1 | HRGMv2_2711_1_885 | 911974 | 913134 | + | 9.B.10.1.1 |
| pfam | HRGMv2_2711_1 | HRGMv2_2711_1_886 | 913127 | 914092 | + | DUF1980_C |
| TC | HRGMv2_2711_1 | HRGMv2_2711_1_887 | 914151 | 914969 | - | 3.A.1.34.1 |
| TC | HRGMv2_2711_1 | HRGMv2_2711_1_888 | 914962 | 915894 | - | 3.A.1.34.1 |
| TC | HRGMv2_2711_1 | HRGMv2_2711_1_889 | 915923 | 916966 | - | 3.A.1.34.1 |
Gene ID: HRGMv2_2711_1_884
Type: CAZyme
Location: 910625 - 911833 (-)
Type: CAZyme
Location: 910625 - 911833 (-)
Gene ID: HRGMv2_2711_1_885
Type: TC
Location: 911974 - 913134 (+)
Type: TC
Location: 911974 - 913134 (+)
Gene ID: HRGMv2_2711_1_886
Type: pfam
Location: 913127 - 914092 (+)
Type: pfam
Location: 913127 - 914092 (+)
Gene ID: HRGMv2_2711_1_887
Type: TC
Location: 914151 - 914969 (-)
Type: TC
Location: 914151 - 914969 (-)
Gene ID: HRGMv2_2711_1_888
Type: TC
Location: 914962 - 915894 (-)
Type: TC
Location: 914962 - 915894 (-)
Gene ID: HRGMv2_2711_1_889
Type: TC
Location: 915923 - 916966 (-)
Type: TC
Location: 915923 - 916966 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp900757655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.