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Cluster: HRGMv2_2711_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2711_1 HRGMv2_2711_1_682 721813 722805 + 3.A.1.24.2
TC HRGMv2_2711_1 HRGMv2_2711_1_683 722810 723487 + 3.A.1.24.5
TC HRGMv2_2711_1 HRGMv2_2711_1_684 723631 724482 + 3.A.1.24.5
pfam HRGMv2_2711_1 HRGMv2_2711_1_685 724547 725530 - NMT1 | NMT1_2 | NMT1_2
TC HRGMv2_2711_1 HRGMv2_2711_1_686 725527 726342 - 3.A.1.17.3
TC HRGMv2_2711_1 HRGMv2_2711_1_687 726335 727093 - 3.A.1.17.8
CAZyme HRGMv2_2711_1 HRGMv2_2711_1_688 727222 728085 - CE4
TC HRGMv2_2711_1 HRGMv2_2711_1_689 728141 730783 - 3.A.3.2.21
Gene ID: HRGMv2_2711_1_682
Type: TC
Location: 721813 - 722805 (+)
Gene ID: HRGMv2_2711_1_683
Type: TC
Location: 722810 - 723487 (+)
Gene ID: HRGMv2_2711_1_684
Type: TC
Location: 723631 - 724482 (+)
Gene ID: HRGMv2_2711_1_685
Type: pfam
Location: 724547 - 725530 (-)
Gene ID: HRGMv2_2711_1_686
Type: TC
Location: 725527 - 726342 (-)
Gene ID: HRGMv2_2711_1_687
Type: TC
Location: 726335 - 727093 (-)
Gene ID: HRGMv2_2711_1_688
Type: CAZyme
Location: 727222 - 728085 (-)
Gene ID: HRGMv2_2711_1_689
Type: TC
Location: 728141 - 730783 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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