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Cluster: HRGMv2_2711_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2711_1 HRGMv2_2711_1_1684 1798877 1799680 - GT8
STP HRGMv2_2711_1 HRGMv2_2711_1_1685 1799752 1800306 - Pribosyltran
TC HRGMv2_2711_1 HRGMv2_2711_1_1686 1800751 1802202 + 2.A.22.5.3
TC HRGMv2_2711_1 HRGMv2_2711_1_1687 1802470 1804014 - 9.B.160.1.10
NULL(UNKNOWN) HRGMv2_2711_1 HRGMv2_2711_1_1688 1804212 1806083 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2711_1 HRGMv2_2711_1_1689 1806058 1806951 - 3.A.1.126.1
TF HRGMv2_2711_1 HRGMv2_2711_1_1690 1806944 1807267 - GntR
STP HRGMv2_2711_1 HRGMv2_2711_1_1691 1807501 1809378 - Pyr_redox_2
TC HRGMv2_2711_1 HRGMv2_2711_1_1692 1809604 1810449 + 3.A.1.3.15
TC HRGMv2_2711_1 HRGMv2_2711_1_1693 1810539 1811189 + 3.A.1.3.12
TC HRGMv2_2711_1 HRGMv2_2711_1_1694 1811205 1811972 + 3.A.1.3.14
Gene ID: HRGMv2_2711_1_1684
Type: CAZyme
Location: 1798877 - 1799680 (-)
Gene ID: HRGMv2_2711_1_1685
Type: STP
Location: 1799752 - 1800306 (-)
Gene ID: HRGMv2_2711_1_1686
Type: TC
Location: 1800751 - 1802202 (+)
Gene ID: HRGMv2_2711_1_1687
Type: TC
Location: 1802470 - 1804014 (-)
Gene ID: HRGMv2_2711_1_1688
Type:
Location: 1804212 - 1806083 (-)
Gene ID: HRGMv2_2711_1_1689
Type: TC
Location: 1806058 - 1806951 (-)
Gene ID: HRGMv2_2711_1_1690
Type: TF
Location: 1806944 - 1807267 (-)
Gene ID: HRGMv2_2711_1_1691
Type: STP
Location: 1807501 - 1809378 (-)
Gene ID: HRGMv2_2711_1_1692
Type: TC
Location: 1809604 - 1810449 (+)
Gene ID: HRGMv2_2711_1_1693
Type: TC
Location: 1810539 - 1811189 (+)
Gene ID: HRGMv2_2711_1_1694
Type: TC
Location: 1811205 - 1811972 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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