Cluster: HRGMv2_2710_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2710
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2710_1 | HRGMv2_2710_1_250 | 287962 | 289170 | - | GH3 |
| TC | HRGMv2_2710_1 | HRGMv2_2710_1_251 | 289309 | 290451 | + | 9.B.10.1.1 |
| pfam | HRGMv2_2710_1 | HRGMv2_2710_1_252 | 290444 | 291409 | + | DUF1980_C |
| TC | HRGMv2_2710_1 | HRGMv2_2710_1_253 | 291460 | 292278 | - | 3.A.1.34.1 |
| TC | HRGMv2_2710_1 | HRGMv2_2710_1_254 | 292271 | 293206 | - | 3.A.1.34.1 |
| TC | HRGMv2_2710_1 | HRGMv2_2710_1_255 | 293235 | 294278 | - | 3.A.1.34.1 |
Gene ID: HRGMv2_2710_1_250
Type: CAZyme
Location: 287962 - 289170 (-)
Type: CAZyme
Location: 287962 - 289170 (-)
Gene ID: HRGMv2_2710_1_251
Type: TC
Location: 289309 - 290451 (+)
Type: TC
Location: 289309 - 290451 (+)
Gene ID: HRGMv2_2710_1_252
Type: pfam
Location: 290444 - 291409 (+)
Type: pfam
Location: 290444 - 291409 (+)
Gene ID: HRGMv2_2710_1_253
Type: TC
Location: 291460 - 292278 (-)
Type: TC
Location: 291460 - 292278 (-)
Gene ID: HRGMv2_2710_1_254
Type: TC
Location: 292271 - 293206 (-)
Type: TC
Location: 292271 - 293206 (-)
Gene ID: HRGMv2_2710_1_255
Type: TC
Location: 293235 - 294278 (-)
Type: TC
Location: 293235 - 294278 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp905215475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.