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Cluster: HRGMv2_2710_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2710_1 HRGMv2_2710_1_130 147335 149035 - GH2
TC HRGMv2_2710_1 HRGMv2_2710_1_131 149356 150711 + 3.D.6.1.2
TC HRGMv2_2710_1 HRGMv2_2710_1_132 150708 151757 + 3.D.6.1.2
TC HRGMv2_2710_1 HRGMv2_2710_1_133 151750 152322 + 3.D.6.1.3
TC HRGMv2_2710_1 HRGMv2_2710_1_134 152336 153025 + 3.D.6.1.2
TC HRGMv2_2710_1 HRGMv2_2710_1_135 153027 153614 + 3.D.6.1.2
TC HRGMv2_2710_1 HRGMv2_2710_1_136 153628 154440 + 3.D.6.1.2
Gene ID: HRGMv2_2710_1_130
Type: CAZyme
Location: 147335 - 149035 (-)
Gene ID: HRGMv2_2710_1_131
Type: TC
Location: 149356 - 150711 (+)
Gene ID: HRGMv2_2710_1_132
Type: TC
Location: 150708 - 151757 (+)
Gene ID: HRGMv2_2710_1_133
Type: TC
Location: 151750 - 152322 (+)
Gene ID: HRGMv2_2710_1_134
Type: TC
Location: 152336 - 153025 (+)
Gene ID: HRGMv2_2710_1_135
Type: TC
Location: 153027 - 153614 (+)
Gene ID: HRGMv2_2710_1_136
Type: TC
Location: 153628 - 154440 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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