Cluster: HRGMv2_2710_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2710
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2710_1 | HRGMv2_2710_1_122 | 139821 | 142046 | + | GT4 |
| pfam | HRGMv2_2710_1 | HRGMv2_2710_1_123 | 142054 | 142674 | + | Formyl_trans_N |
| STP | HRGMv2_2710_1 | HRGMv2_2710_1_124 | 142732 | 143178 | - | ACT |
| TC | HRGMv2_2710_1 | HRGMv2_2710_1_125 | 143291 | 143719 | + | 2.A.7.21.8 |
Gene ID: HRGMv2_2710_1_122
Type: CAZyme
Location: 139821 - 142046 (+)
Type: CAZyme
Location: 139821 - 142046 (+)
Gene ID: HRGMv2_2710_1_123
Type: pfam
Location: 142054 - 142674 (+)
Type: pfam
Location: 142054 - 142674 (+)
Gene ID: HRGMv2_2710_1_124
Type: STP
Location: 142732 - 143178 (-)
Type: STP
Location: 142732 - 143178 (-)
Gene ID: HRGMv2_2710_1_125
Type: TC
Location: 143291 - 143719 (+)
Type: TC
Location: 143291 - 143719 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp905215475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2710_1_123 | vegetarian > omnivore | 1.12897 | 0.00012 |
| HRGMv2_2710_1_124 | vegetarian > omnivore | 1.19459 | 0.00012 |