Cluster: HRGMv2_2708_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2708
- CGC Family ID: CGCFAM_01677
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2708_142 | HRGMv2_2708_142_2 | 450 | 2660 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_2708_142 | HRGMv2_2708_142_3 | 3173 | 3304 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2708_142 | HRGMv2_2708_142_4 | 3616 | 4983 | + | 3.B.1.1.6 |
Gene ID: HRGMv2_2708_142_2
Type: CAZyme
Location: 450 - 2660 (+)
Type: CAZyme
Location: 450 - 2660 (+)
Gene ID: HRGMv2_2708_142_3
Type:
Location: 3173 - 3304 (+)
Type:
Location: 3173 - 3304 (+)
Gene ID: HRGMv2_2708_142_4
Type: TC
Location: 3616 - 4983 (+)
Type: TC
Location: 3616 - 4983 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.