Cluster: HRGMv2_2708_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2708
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2708_61 | HRGMv2_2708_61_2 | 722 | 2020 | - | 2.A.56.1.9 |
| TC | HRGMv2_2708_61 | HRGMv2_2708_61_3 | 2017 | 2589 | - | 2.A.56.1.9 |
| TC | HRGMv2_2708_61 | HRGMv2_2708_61_4 | 2659 | 3675 | - | 2.A.56.1.3 |
| pfam | HRGMv2_2708_61 | HRGMv2_2708_61_5 | 3761 | 4801 | - | ADH_zinc_N | 3HCDH_N | ADH_N |
| TF | HRGMv2_2708_61 | HRGMv2_2708_61_6 | 5018 | 5719 | - | GntR |
| CAZyme | HRGMv2_2708_61 | HRGMv2_2708_61_7 | 6068 | 7354 | - | GT2 |
Gene ID: HRGMv2_2708_61_2
Type: TC
Location: 722 - 2020 (-)
Type: TC
Location: 722 - 2020 (-)
Gene ID: HRGMv2_2708_61_3
Type: TC
Location: 2017 - 2589 (-)
Type: TC
Location: 2017 - 2589 (-)
Gene ID: HRGMv2_2708_61_4
Type: TC
Location: 2659 - 3675 (-)
Type: TC
Location: 2659 - 3675 (-)
Gene ID: HRGMv2_2708_61_5
Type: pfam
Location: 3761 - 4801 (-)
Type: pfam
Location: 3761 - 4801 (-)
Gene ID: HRGMv2_2708_61_6
Type: TF
Location: 5018 - 5719 (-)
Type: TF
Location: 5018 - 5719 (-)
Gene ID: HRGMv2_2708_61_7
Type: CAZyme
Location: 6068 - 7354 (-)
Type: CAZyme
Location: 6068 - 7354 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.