Cluster: HRGMv2_2708_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2708
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2708_24 | HRGMv2_2708_24_11 | 8250 | 9749 | + | 3.A.1.121.3 |
| pfam | HRGMv2_2708_24 | HRGMv2_2708_24_12 | 9834 | 10322 | - | tRNA_edit |
| pfam | HRGMv2_2708_24 | HRGMv2_2708_24_13 | 10326 | 10718 | - | FlK |
| CAZyme | HRGMv2_2708_24 | HRGMv2_2708_24_14 | 10794 | 12074 | - | GH18 |
Gene ID: HRGMv2_2708_24_11
Type: TC
Location: 8250 - 9749 (+)
Type: TC
Location: 8250 - 9749 (+)
Gene ID: HRGMv2_2708_24_12
Type: pfam
Location: 9834 - 10322 (-)
Type: pfam
Location: 9834 - 10322 (-)
Gene ID: HRGMv2_2708_24_13
Type: pfam
Location: 10326 - 10718 (-)
Type: pfam
Location: 10326 - 10718 (-)
Gene ID: HRGMv2_2708_24_14
Type: CAZyme
Location: 10794 - 12074 (-)
Type: CAZyme
Location: 10794 - 12074 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.