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Cluster: HRGMv2_2705_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2705_1 HRGMv2_2705_1_1231 1228660 1229379 - 1.C.113.1.3
TC HRGMv2_2705_1 HRGMv2_2705_1_1232 1229532 1231958 - 3.A.9.1.2
STP HRGMv2_2705_1 HRGMv2_2705_1_1233 1232138 1232308 + Fer4 | Fer4
peptidase HRGMv2_2705_1 HRGMv2_2705_1_1234 1232387 1233334 + S09.UPW
CAZyme HRGMv2_2705_1 HRGMv2_2705_1_1235 1233461 1234900 + GH77
TC HRGMv2_2705_1 HRGMv2_2705_1_1236 1235181 1237418 - 3.A.16.1.3
Gene ID: HRGMv2_2705_1_1231
Type: TC
Location: 1228660 - 1229379 (-)
Gene ID: HRGMv2_2705_1_1232
Type: TC
Location: 1229532 - 1231958 (-)
Gene ID: HRGMv2_2705_1_1233
Type: STP
Location: 1232138 - 1232308 (+)
Gene ID: HRGMv2_2705_1_1234
Type: peptidase
Location: 1232387 - 1233334 (+)
Gene ID: HRGMv2_2705_1_1235
Type: CAZyme
Location: 1233461 - 1234900 (+)
Gene ID: HRGMv2_2705_1_1236
Type: TC
Location: 1235181 - 1237418 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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