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Cluster: HRGMv2_2705_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2705_1 HRGMv2_2705_1_775 749009 751006 - 3.B.1.1.1
NULL(UNKNOWN) HRGMv2_2705_1 HRGMv2_2705_1_776 751318 751449 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2705_1 HRGMv2_2705_1_777 751957 754167 - GT4
pfam HRGMv2_2705_1 HRGMv2_2705_1_778 754175 754687 - DUF4330
pfam HRGMv2_2705_1 HRGMv2_2705_1_779 754684 755187 - DUF4330
CAZyme HRGMv2_2705_1 HRGMv2_2705_1_780 755174 756304 - GT4
TC HRGMv2_2705_1 HRGMv2_2705_1_781 756301 757749 - 9.B.67.1.1
TC HRGMv2_2705_1 HRGMv2_2705_1_782 757753 759318 - 2.A.66.4.7
Gene ID: HRGMv2_2705_1_775
Type: TC
Location: 749009 - 751006 (-)
Gene ID: HRGMv2_2705_1_776
Type:
Location: 751318 - 751449 (-)
Gene ID: HRGMv2_2705_1_777
Type: CAZyme
Location: 751957 - 754167 (-)
Gene ID: HRGMv2_2705_1_778
Type: pfam
Location: 754175 - 754687 (-)
Gene ID: HRGMv2_2705_1_779
Type: pfam
Location: 754684 - 755187 (-)
Gene ID: HRGMv2_2705_1_780
Type: CAZyme
Location: 755174 - 756304 (-)
Gene ID: HRGMv2_2705_1_781
Type: TC
Location: 756301 - 757749 (-)
Gene ID: HRGMv2_2705_1_782
Type: TC
Location: 757753 - 759318 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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