Cluster: HRGMv2_2705_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2705
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2705_1 | HRGMv2_2705_1_456 | 455800 | 457080 | + | GH18 |
| pfam | HRGMv2_2705_1 | HRGMv2_2705_1_457 | 457156 | 457548 | + | FlK |
| pfam | HRGMv2_2705_1 | HRGMv2_2705_1_458 | 457552 | 458040 | + | tRNA_edit |
| TC | HRGMv2_2705_1 | HRGMv2_2705_1_459 | 458142 | 459632 | - | 3.A.1.121.3 |
Gene ID: HRGMv2_2705_1_456
Type: CAZyme
Location: 455800 - 457080 (+)
Type: CAZyme
Location: 455800 - 457080 (+)
Gene ID: HRGMv2_2705_1_457
Type: pfam
Location: 457156 - 457548 (+)
Type: pfam
Location: 457156 - 457548 (+)
Gene ID: HRGMv2_2705_1_458
Type: pfam
Location: 457552 - 458040 (+)
Type: pfam
Location: 457552 - 458040 (+)
Gene ID: HRGMv2_2705_1_459
Type: TC
Location: 458142 - 459632 (-)
Type: TC
Location: 458142 - 459632 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp900066825
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.