Cluster: HRGMv2_2705_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2705
- CGC Family ID: CGCFAM_10155
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2705_1 | HRGMv2_2705_1_1761 | 1833594 | 1834892 | - | 2.A.56.1.9 |
| TC | HRGMv2_2705_1 | HRGMv2_2705_1_1762 | 1834889 | 1835461 | - | 2.A.56.1.9 |
| TC | HRGMv2_2705_1 | HRGMv2_2705_1_1763 | 1835530 | 1836546 | - | 2.A.56.1.3 |
| pfam | HRGMv2_2705_1 | HRGMv2_2705_1_1764 | 1836632 | 1837672 | - | ADH_zinc_N | 3HCDH_N | ADH_N |
| TF | HRGMv2_2705_1 | HRGMv2_2705_1_1765 | 1837875 | 1838597 | - | GntR |
| CAZyme | HRGMv2_2705_1 | HRGMv2_2705_1_1766 | 1838860 | 1840146 | - | GT2 |
Gene ID: HRGMv2_2705_1_1761
Type: TC
Location: 1833594 - 1834892 (-)
Type: TC
Location: 1833594 - 1834892 (-)
Gene ID: HRGMv2_2705_1_1762
Type: TC
Location: 1834889 - 1835461 (-)
Type: TC
Location: 1834889 - 1835461 (-)
Gene ID: HRGMv2_2705_1_1763
Type: TC
Location: 1835530 - 1836546 (-)
Type: TC
Location: 1835530 - 1836546 (-)
Gene ID: HRGMv2_2705_1_1764
Type: pfam
Location: 1836632 - 1837672 (-)
Type: pfam
Location: 1836632 - 1837672 (-)
Gene ID: HRGMv2_2705_1_1765
Type: TF
Location: 1837875 - 1838597 (-)
Type: TF
Location: 1837875 - 1838597 (-)
Gene ID: HRGMv2_2705_1_1766
Type: CAZyme
Location: 1838860 - 1840146 (-)
Type: CAZyme
Location: 1838860 - 1840146 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter sp900066825
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.