Cluster: HRGMv2_2703_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2703
- CGC Family ID: CGCFAM_02000
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2703_7 | HRGMv2_2703_7_3 | 1282 | 2877 | - | 2.A.21.3.21 |
| STP | HRGMv2_2703_7 | HRGMv2_2703_7_4 | 3220 | 4236 | - | Peripla_BP_1 |
| pfam | HRGMv2_2703_7 | HRGMv2_2703_7_5 | 4439 | 5332 | - | AP_endonuc_2 |
| CAZyme | HRGMv2_2703_7 | HRGMv2_2703_7_6 | 5450 | 6577 | - | GH109 |
| NULL(UNKNOWN) | HRGMv2_2703_7 | HRGMv2_2703_7_7 | 6725 | 7225 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2703_7 | HRGMv2_2703_7_8 | 7258 | 7917 | - | 4.F.1.1.7 |
Gene ID: HRGMv2_2703_7_3
Type: TC
Location: 1282 - 2877 (-)
Type: TC
Location: 1282 - 2877 (-)
Gene ID: HRGMv2_2703_7_4
Type: STP
Location: 3220 - 4236 (-)
Type: STP
Location: 3220 - 4236 (-)
Gene ID: HRGMv2_2703_7_5
Type: pfam
Location: 4439 - 5332 (-)
Type: pfam
Location: 4439 - 5332 (-)
Gene ID: HRGMv2_2703_7_6
Type: CAZyme
Location: 5450 - 6577 (-)
Type: CAZyme
Location: 5450 - 6577 (-)
Gene ID: HRGMv2_2703_7_7
Type:
Location: 6725 - 7225 (-)
Type:
Location: 6725 - 7225 (-)
Gene ID: HRGMv2_2703_7_8
Type: TC
Location: 7258 - 7917 (-)
Type: TC
Location: 7258 - 7917 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Agathobaculum
Species
Agathobaculum butyriciproducens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.