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Cluster: HRGMv2_2703_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2703_4 HRGMv2_2703_4_74 71839 73026 - 2.A.23.2.6
pfam HRGMv2_2703_4 HRGMv2_2703_4_75 73653 75287 + VanW | G5 | PG_binding_4
pfam HRGMv2_2703_4 HRGMv2_2703_4_76 75308 76240 + DUF975
TC HRGMv2_2703_4 HRGMv2_2703_4_77 76675 77547 + 1.A.23.7.1
CAZyme HRGMv2_2703_4 HRGMv2_2703_4_78 77731 78888 + GH179
pfam HRGMv2_2703_4 HRGMv2_2703_4_79 78973 80130 - DHHW | ALGX
TC HRGMv2_2703_4 HRGMv2_2703_4_80 80144 81520 - 2.A.50.2.1
NULL(UNKNOWN) HRGMv2_2703_4 HRGMv2_2703_4_81 81727 83067 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2703_4 HRGMv2_2703_4_82 83216 84535 + 2.A.66.1.26
Gene ID: HRGMv2_2703_4_74
Type: TC
Location: 71839 - 73026 (-)
Gene ID: HRGMv2_2703_4_75
Type: pfam
Location: 73653 - 75287 (+)
Gene ID: HRGMv2_2703_4_76
Type: pfam
Location: 75308 - 76240 (+)
Gene ID: HRGMv2_2703_4_77
Type: TC
Location: 76675 - 77547 (+)
Gene ID: HRGMv2_2703_4_78
Type: CAZyme
Location: 77731 - 78888 (+)
Gene ID: HRGMv2_2703_4_79
Type: pfam
Location: 78973 - 80130 (-)
Gene ID: HRGMv2_2703_4_80
Type: TC
Location: 80144 - 81520 (-)
Gene ID: HRGMv2_2703_4_81
Type:
Location: 81727 - 83067 (+)
Gene ID: HRGMv2_2703_4_82
Type: TC
Location: 83216 - 84535 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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