Cluster: HRGMv2_2703_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2703
- CGC Family ID: CGCFAM_00056
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2703_34 | HRGMv2_2703_34_3 | 1312 | 3135 | + | CE4 |
| TF | HRGMv2_2703_34 | HRGMv2_2703_34_4 | 3267 | 3980 | - | Trans_reg_C |
| STP | HRGMv2_2703_34 | HRGMv2_2703_34_5 | 3977 | 5056 | - | HATPase_c | HisKA |
| TC | HRGMv2_2703_34 | HRGMv2_2703_34_6 | 5365 | 6003 | + | 9.B.149.1.11 |
Gene ID: HRGMv2_2703_34_3
Type: CAZyme
Location: 1312 - 3135 (+)
Type: CAZyme
Location: 1312 - 3135 (+)
Gene ID: HRGMv2_2703_34_4
Type: TF
Location: 3267 - 3980 (-)
Type: TF
Location: 3267 - 3980 (-)
Gene ID: HRGMv2_2703_34_5
Type: STP
Location: 3977 - 5056 (-)
Type: STP
Location: 3977 - 5056 (-)
Gene ID: HRGMv2_2703_34_6
Type: TC
Location: 5365 - 6003 (+)
Type: TC
Location: 5365 - 6003 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Agathobaculum
Species
Agathobaculum butyriciproducens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.