Cluster: HRGMv2_2703_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2703
- CGC Family ID: CGCFAM_00371
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2703_20 | HRGMv2_2703_20_9 | 10290 | 11336 | + | 3.A.1.24.3 |
| TC | HRGMv2_2703_20 | HRGMv2_2703_20_10 | 11317 | 11997 | + | 3.A.1.24.6 |
| pfam | HRGMv2_2703_20 | HRGMv2_2703_20_11 | 12010 | 12963 | + | Ldh_1_N | Ldh_1_C |
| TC | HRGMv2_2703_20 | HRGMv2_2703_20_12 | 13009 | 13899 | + | 3.A.1.24.1 |
| CAZyme | HRGMv2_2703_20 | HRGMv2_2703_20_13 | 13964 | 15352 | + | AA4 |
Gene ID: HRGMv2_2703_20_9
Type: TC
Location: 10290 - 11336 (+)
Type: TC
Location: 10290 - 11336 (+)
Gene ID: HRGMv2_2703_20_10
Type: TC
Location: 11317 - 11997 (+)
Type: TC
Location: 11317 - 11997 (+)
Gene ID: HRGMv2_2703_20_11
Type: pfam
Location: 12010 - 12963 (+)
Type: pfam
Location: 12010 - 12963 (+)
Gene ID: HRGMv2_2703_20_12
Type: TC
Location: 13009 - 13899 (+)
Type: TC
Location: 13009 - 13899 (+)
Gene ID: HRGMv2_2703_20_13
Type: CAZyme
Location: 13964 - 15352 (+)
Type: CAZyme
Location: 13964 - 15352 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Agathobaculum
Species
Agathobaculum butyriciproducens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2703_20_13 | vegetarian > vegan | 1.11935 | 0.02258 |