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Cluster: HRGMv2_2702_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2702_18 HRGMv2_2702_18_34 30275 32551 - 3.A.9.1.2
pfam HRGMv2_2702_18 HRGMv2_2702_18_35 32617 33777 - DUF5711
pfam HRGMv2_2702_18 HRGMv2_2702_18_36 33770 34531 - PseudoU_synth_1 | PseudoU_synth_1
TC HRGMv2_2702_18 HRGMv2_2702_18_37 34547 35350 - 3.A.1.25.4
TC HRGMv2_2702_18 HRGMv2_2702_18_38 35343 36209 - 3.A.1.25.6
TC HRGMv2_2702_18 HRGMv2_2702_18_39 36233 37087 - 3.A.1.26.7
pfam HRGMv2_2702_18 HRGMv2_2702_18_40 37084 37956 - Cons_hypoth95 | Methyltrans_SAM
CAZyme HRGMv2_2702_18 HRGMv2_2702_18_41 37963 40572 - GT51
Gene ID: HRGMv2_2702_18_34
Type: TC
Location: 30275 - 32551 (-)
Gene ID: HRGMv2_2702_18_35
Type: pfam
Location: 32617 - 33777 (-)
Gene ID: HRGMv2_2702_18_36
Type: pfam
Location: 33770 - 34531 (-)
Gene ID: HRGMv2_2702_18_37
Type: TC
Location: 34547 - 35350 (-)
Gene ID: HRGMv2_2702_18_38
Type: TC
Location: 35343 - 36209 (-)
Gene ID: HRGMv2_2702_18_39
Type: TC
Location: 36233 - 37087 (-)
Gene ID: HRGMv2_2702_18_40
Type: pfam
Location: 37084 - 37956 (-)
Gene ID: HRGMv2_2702_18_41
Type: CAZyme
Location: 37963 - 40572 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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