Cluster: HRGMv2_2702_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2702
- CGC Family ID: CGCFAM_00775
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2702_11 | HRGMv2_2702_11_31 | 37186 | 38916 | - | 3.A.1.135.6 |
| pfam | HRGMv2_2702_11 | HRGMv2_2702_11_32 | 39036 | 39266 | - | KH_KhpA-B |
| pfam | HRGMv2_2702_11 | HRGMv2_2702_11_33 | 39284 | 39523 | - | Ribosomal_S16 |
| TC | HRGMv2_2702_11 | HRGMv2_2702_11_34 | 39584 | 40927 | - | 3.A.5.1.1 |
| STP | HRGMv2_2702_11 | HRGMv2_2702_11_35 | 40930 | 41280 | - | Sigma70_r4_2 |
| CAZyme | HRGMv2_2702_11 | HRGMv2_2702_11_36 | 41411 | 42208 | + | CE4 |
Gene ID: HRGMv2_2702_11_31
Type: TC
Location: 37186 - 38916 (-)
Type: TC
Location: 37186 - 38916 (-)
Gene ID: HRGMv2_2702_11_32
Type: pfam
Location: 39036 - 39266 (-)
Type: pfam
Location: 39036 - 39266 (-)
Gene ID: HRGMv2_2702_11_33
Type: pfam
Location: 39284 - 39523 (-)
Type: pfam
Location: 39284 - 39523 (-)
Gene ID: HRGMv2_2702_11_34
Type: TC
Location: 39584 - 40927 (-)
Type: TC
Location: 39584 - 40927 (-)
Gene ID: HRGMv2_2702_11_35
Type: STP
Location: 40930 - 41280 (-)
Type: STP
Location: 40930 - 41280 (-)
Gene ID: HRGMv2_2702_11_36
Type: CAZyme
Location: 41411 - 42208 (+)
Type: CAZyme
Location: 41411 - 42208 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp003525905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.