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Cluster: HRGMv2_2702_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2702_8 HRGMv2_2702_8_30 44052 45587 - 3.A.1.5.20
TC HRGMv2_2702_8 HRGMv2_2702_8_31 45574 46566 - 3.A.1.5.15
TC HRGMv2_2702_8 HRGMv2_2702_8_32 46581 48521 - 3.A.1.5.20
TC HRGMv2_2702_8 HRGMv2_2702_8_33 48534 49607 - 3.A.1.5.20
STP HRGMv2_2702_8 HRGMv2_2702_8_34 50010 52271 - SBP_bac_5
peptidase HRGMv2_2702_8 HRGMv2_2702_8_35 52594 54291 - M03.010
CAZyme HRGMv2_2702_8 HRGMv2_2702_8_36 54338 56212 - GH13_39
CAZyme HRGMv2_2702_8 HRGMv2_2702_8_37 56214 58676 - GT35
CAZyme HRGMv2_2702_8 HRGMv2_2702_8_38 58732 60168 - GT5
pfam HRGMv2_2702_8 HRGMv2_2702_8_39 60165 61283 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_2702_8 HRGMv2_2702_8_40 61301 62488 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_2702_8 HRGMv2_2702_8_41 62511 64409 - CBM48 | GH13_9
Gene ID: HRGMv2_2702_8_30
Type: TC
Location: 44052 - 45587 (-)
Gene ID: HRGMv2_2702_8_31
Type: TC
Location: 45574 - 46566 (-)
Gene ID: HRGMv2_2702_8_32
Type: TC
Location: 46581 - 48521 (-)
Gene ID: HRGMv2_2702_8_33
Type: TC
Location: 48534 - 49607 (-)
Gene ID: HRGMv2_2702_8_34
Type: STP
Location: 50010 - 52271 (-)
Gene ID: HRGMv2_2702_8_35
Type: peptidase
Location: 52594 - 54291 (-)
Gene ID: HRGMv2_2702_8_36
Type: CAZyme
Location: 54338 - 56212 (-)
Gene ID: HRGMv2_2702_8_37
Type: CAZyme
Location: 56214 - 58676 (-)
Gene ID: HRGMv2_2702_8_38
Type: CAZyme
Location: 58732 - 60168 (-)
Gene ID: HRGMv2_2702_8_39
Type: pfam
Location: 60165 - 61283 (-)
Gene ID: HRGMv2_2702_8_40
Type: pfam
Location: 61301 - 62488 (-)
Gene ID: HRGMv2_2702_8_41
Type: CAZyme
Location: 62511 - 64409 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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