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Cluster: HRGMv2_2702_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2702_6 HRGMv2_2702_6_11 10443 12155 + 8.A.59.2.1
STP HRGMv2_2702_6 HRGMv2_2702_6_12 12142 13107 + Peripla_BP_1
STP HRGMv2_2702_6 HRGMv2_2702_6_13 13279 14472 + Peripla_BP_3
TC HRGMv2_2702_6 HRGMv2_2702_6_14 14585 16087 + 3.A.1.2.3
TC HRGMv2_2702_6 HRGMv2_2702_6_15 16103 17188 + 3.A.1.2.3
TC HRGMv2_2702_6 HRGMv2_2702_6_16 17614 19017 + 2.A.66.1.28
TC HRGMv2_2702_6 HRGMv2_2702_6_17 19018 20778 + 3.A.1.106.2
pfam HRGMv2_2702_6 HRGMv2_2702_6_18 21047 22132 + APH
NULL(UNKNOWN) HRGMv2_2702_6 HRGMv2_2702_6_19 22142 23530 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2702_6 HRGMv2_2702_6_20 23554 24681 + CE9
Gene ID: HRGMv2_2702_6_11
Type: TC
Location: 10443 - 12155 (+)
Gene ID: HRGMv2_2702_6_12
Type: STP
Location: 12142 - 13107 (+)
Gene ID: HRGMv2_2702_6_13
Type: STP
Location: 13279 - 14472 (+)
Gene ID: HRGMv2_2702_6_14
Type: TC
Location: 14585 - 16087 (+)
Gene ID: HRGMv2_2702_6_15
Type: TC
Location: 16103 - 17188 (+)
Gene ID: HRGMv2_2702_6_16
Type: TC
Location: 17614 - 19017 (+)
Gene ID: HRGMv2_2702_6_17
Type: TC
Location: 19018 - 20778 (+)
Gene ID: HRGMv2_2702_6_18
Type: pfam
Location: 21047 - 22132 (+)
Gene ID: HRGMv2_2702_6_19
Type:
Location: 22142 - 23530 (+)
Gene ID: HRGMv2_2702_6_20
Type: CAZyme
Location: 23554 - 24681 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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