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Cluster: HRGMv2_2695_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2695_8 HRGMv2_2695_8_15 22652 23563 - GT2
CAZyme HRGMv2_2695_8 HRGMv2_2695_8_16 23567 24655 - GT4
pfam HRGMv2_2695_8 HRGMv2_2695_8_17 24652 25371 - DUF6625
CAZyme HRGMv2_2695_8 HRGMv2_2695_8_18 25608 26762 - GT4
pfam HRGMv2_2695_8 HRGMv2_2695_8_19 26772 27944 - Radical_SAM | SPASM
pfam HRGMv2_2695_8 HRGMv2_2695_8_20 27937 28932 - Acyl_transf_3
CAZyme HRGMv2_2695_8 HRGMv2_2695_8_21 28943 30130 - GT4
pfam HRGMv2_2695_8 HRGMv2_2695_8_22 30127 31179 - Acyl_transf_3
CAZyme HRGMv2_2695_8 HRGMv2_2695_8_23 31169 32284 - GT4
TC HRGMv2_2695_8 HRGMv2_2695_8_24 32323 33831 - 9.B.18.1.2
TC HRGMv2_2695_8 HRGMv2_2695_8_25 33890 34675 - 8.A.3.2.1
Gene ID: HRGMv2_2695_8_15
Type: CAZyme
Location: 22652 - 23563 (-)
Gene ID: HRGMv2_2695_8_16
Type: CAZyme
Location: 23567 - 24655 (-)
Gene ID: HRGMv2_2695_8_17
Type: pfam
Location: 24652 - 25371 (-)
Gene ID: HRGMv2_2695_8_18
Type: CAZyme
Location: 25608 - 26762 (-)
Gene ID: HRGMv2_2695_8_19
Type: pfam
Location: 26772 - 27944 (-)
Gene ID: HRGMv2_2695_8_20
Type: pfam
Location: 27937 - 28932 (-)
Gene ID: HRGMv2_2695_8_21
Type: CAZyme
Location: 28943 - 30130 (-)
Gene ID: HRGMv2_2695_8_22
Type: pfam
Location: 30127 - 31179 (-)
Gene ID: HRGMv2_2695_8_23
Type: CAZyme
Location: 31169 - 32284 (-)
Gene ID: HRGMv2_2695_8_24
Type: TC
Location: 32323 - 33831 (-)
Gene ID: HRGMv2_2695_8_25
Type: TC
Location: 33890 - 34675 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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