Cluster: HRGMv2_2695_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2695
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2695_8 | HRGMv2_2695_8_4 | 5407 | 6681 | - | 9.A.40.2.2 |
| pfam | HRGMv2_2695_8 | HRGMv2_2695_8_5 | 6863 | 8293 | - | Radical_SAM |
| CAZyme | HRGMv2_2695_8 | HRGMv2_2695_8_6 | 8641 | 11700 | - | GH2 |
| TC | HRGMv2_2695_8 | HRGMv2_2695_8_7 | 11722 | 12339 | - | 9.B.18.1.2 |
| NULL(UNKNOWN) | HRGMv2_2695_8 | HRGMv2_2695_8_8 | 12694 | 13281 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2695_8 | HRGMv2_2695_8_9 | 13467 | 16226 | + | 3.A.5.1.3 |
Gene ID: HRGMv2_2695_8_4
Type: TC
Location: 5407 - 6681 (-)
Type: TC
Location: 5407 - 6681 (-)
Gene ID: HRGMv2_2695_8_5
Type: pfam
Location: 6863 - 8293 (-)
Type: pfam
Location: 6863 - 8293 (-)
Gene ID: HRGMv2_2695_8_6
Type: CAZyme
Location: 8641 - 11700 (-)
Type: CAZyme
Location: 8641 - 11700 (-)
Gene ID: HRGMv2_2695_8_7
Type: TC
Location: 11722 - 12339 (-)
Type: TC
Location: 11722 - 12339 (-)
Gene ID: HRGMv2_2695_8_8
Type:
Location: 12694 - 13281 (+)
Type:
Location: 12694 - 13281 (+)
Gene ID: HRGMv2_2695_8_9
Type: TC
Location: 13467 - 16226 (+)
Type: TC
Location: 13467 - 16226 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp014465955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2695_8_5 | vegetarian > omnivore | 1.03382 | 0.02973 |
| HRGMv2_2695_8_7 | vegetarian > omnivore | 18.39848 | 0.02973 |