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Cluster: HRGMv2_2695_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2695_2 HRGMv2_2695_2_144 157468 158967 - GH20
pfam HRGMv2_2695_2 HRGMv2_2695_2_145 159071 160306 + Metallophos
CAZyme HRGMv2_2695_2 HRGMv2_2695_2_146 160413 162851 - GH3
TF HRGMv2_2695_2 HRGMv2_2695_2_147 162921 163139 - HTH_3
NULL(UNKNOWN) HRGMv2_2695_2 HRGMv2_2695_2_148 163126 163269 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2695_2 HRGMv2_2695_2_149 163326 165101 + 3.A.1.111.2
TC HRGMv2_2695_2 HRGMv2_2695_2_150 165098 166918 + 3.A.1.111.2
pfam HRGMv2_2695_2 HRGMv2_2695_2_151 166959 167318 - Y1_Tnp
NULL(UNKNOWN) HRGMv2_2695_2 HRGMv2_2695_2_152 167321 167950 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2695_2 HRGMv2_2695_2_153 167943 169409 - 2.A.2.3.2
Gene ID: HRGMv2_2695_2_144
Type: CAZyme
Location: 157468 - 158967 (-)
Gene ID: HRGMv2_2695_2_145
Type: pfam
Location: 159071 - 160306 (+)
Gene ID: HRGMv2_2695_2_146
Type: CAZyme
Location: 160413 - 162851 (-)
Gene ID: HRGMv2_2695_2_147
Type: TF
Location: 162921 - 163139 (-)
Gene ID: HRGMv2_2695_2_148
Type:
Location: 163126 - 163269 (-)
Gene ID: HRGMv2_2695_2_149
Type: TC
Location: 163326 - 165101 (+)
Gene ID: HRGMv2_2695_2_150
Type: TC
Location: 165098 - 166918 (+)
Gene ID: HRGMv2_2695_2_151
Type: pfam
Location: 166959 - 167318 (-)
Gene ID: HRGMv2_2695_2_152
Type:
Location: 167321 - 167950 (-)
Gene ID: HRGMv2_2695_2_153
Type: TC
Location: 167943 - 169409 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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