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Cluster: HRGMv2_2695_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2695_2 HRGMv2_2695_2_120 125633 126682 - GH16
pfam HRGMv2_2695_2 HRGMv2_2695_2_121 126687 128165 - Metallophos
CAZyme HRGMv2_2695_2 HRGMv2_2695_2_122 128179 129648 - GH29
CAZyme HRGMv2_2695_2 HRGMv2_2695_2_123 129653 131776 - GH89
pfam HRGMv2_2695_2 HRGMv2_2695_2_124 131780 134191 - GH123_N
TF HRGMv2_2695_2 HRGMv2_2695_2_125 134710 135153 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_2695_2 HRGMv2_2695_2_126 135403 136755 - GH29
pfam HRGMv2_2695_2 HRGMv2_2695_2_127 136770 139220 - MFS_2
CAZyme HRGMv2_2695_2 HRGMv2_2695_2_128 139415 141694 - GH31_15
TC HRGMv2_2695_2 HRGMv2_2695_2_129 141950 143974 - 3.A.1.134.9
TC HRGMv2_2695_2 HRGMv2_2695_2_130 143971 144735 - 3.A.1.134.4
Gene ID: HRGMv2_2695_2_120
Type: CAZyme
Location: 125633 - 126682 (-)
Gene ID: HRGMv2_2695_2_121
Type: pfam
Location: 126687 - 128165 (-)
Gene ID: HRGMv2_2695_2_122
Type: CAZyme
Location: 128179 - 129648 (-)
Gene ID: HRGMv2_2695_2_123
Type: CAZyme
Location: 129653 - 131776 (-)
Gene ID: HRGMv2_2695_2_124
Type: pfam
Location: 131780 - 134191 (-)
Gene ID: HRGMv2_2695_2_125
Type: TF
Location: 134710 - 135153 (+)
Gene ID: HRGMv2_2695_2_126
Type: CAZyme
Location: 135403 - 136755 (-)
Gene ID: HRGMv2_2695_2_127
Type: pfam
Location: 136770 - 139220 (-)
Gene ID: HRGMv2_2695_2_128
Type: CAZyme
Location: 139415 - 141694 (-)
Gene ID: HRGMv2_2695_2_129
Type: TC
Location: 141950 - 143974 (-)
Gene ID: HRGMv2_2695_2_130
Type: TC
Location: 143971 - 144735 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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