dbCAN Logo

Cluster: HRGMv2_2695_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2695_2 HRGMv2_2695_2_107 108113 109903 - 3.A.1.111.2
TC HRGMv2_2695_2 HRGMv2_2695_2_108 109893 111716 - 3.A.1.111.2
NULL(UNKNOWN) HRGMv2_2695_2 HRGMv2_2695_2_109 111798 111890 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2695_2 HRGMv2_2695_2_110 112086 112994 + 2.A.58.2.2
TF HRGMv2_2695_2 HRGMv2_2695_2_111 113120 113734 + HTH_3
CAZyme HRGMv2_2695_2 HRGMv2_2695_2_112 113783 115816 - PL35
pfam HRGMv2_2695_2 HRGMv2_2695_2_113 116083 117024 + 2-oxoacid_dh | 2-oxoacid_dh
pfam HRGMv2_2695_2 HRGMv2_2695_2_114 117100 117984 - DUF362
CAZyme HRGMv2_2695_2 HRGMv2_2695_2_115 117996 119426 - GH20
Gene ID: HRGMv2_2695_2_107
Type: TC
Location: 108113 - 109903 (-)
Gene ID: HRGMv2_2695_2_108
Type: TC
Location: 109893 - 111716 (-)
Gene ID: HRGMv2_2695_2_109
Type:
Location: 111798 - 111890 (-)
Gene ID: HRGMv2_2695_2_110
Type: TC
Location: 112086 - 112994 (+)
Gene ID: HRGMv2_2695_2_111
Type: TF
Location: 113120 - 113734 (+)
Gene ID: HRGMv2_2695_2_112
Type: CAZyme
Location: 113783 - 115816 (-)
Gene ID: HRGMv2_2695_2_113
Type: pfam
Location: 116083 - 117024 (+)
Gene ID: HRGMv2_2695_2_114
Type: pfam
Location: 117100 - 117984 (-)
Gene ID: HRGMv2_2695_2_115
Type: CAZyme
Location: 117996 - 119426 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List