Cluster: HRGMv2_2695_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2695
- CGC Family ID: CGCFAM_00504
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2695_1 | HRGMv2_2695_1_875 | 903198 | 905390 | - | 2.A.2.3.4 |
| pfam | HRGMv2_2695_1 | HRGMv2_2695_1_876 | 906149 | 906511 | + | Alpha_L_fucos |
| pfam | HRGMv2_2695_1 | HRGMv2_2695_1_877 | 906462 | 906920 | + | Alpha_L_fucos |
| CAZyme | HRGMv2_2695_1 | HRGMv2_2695_1_878 | 907020 | 909401 | + | GH2 |
| STP | HRGMv2_2695_1 | HRGMv2_2695_1_879 | 909568 | 911217 | - | HATPase_c | HisKA |
| TF | HRGMv2_2695_1 | HRGMv2_2695_1_880 | 911214 | 911891 | - | Trans_reg_C |
| TC | HRGMv2_2695_1 | HRGMv2_2695_1_881 | 911938 | 912690 | - | 3.A.1.7.5 |
Gene ID: HRGMv2_2695_1_875
Type: TC
Location: 903198 - 905390 (-)
Type: TC
Location: 903198 - 905390 (-)
Gene ID: HRGMv2_2695_1_876
Type: pfam
Location: 906149 - 906511 (+)
Type: pfam
Location: 906149 - 906511 (+)
Gene ID: HRGMv2_2695_1_877
Type: pfam
Location: 906462 - 906920 (+)
Type: pfam
Location: 906462 - 906920 (+)
Gene ID: HRGMv2_2695_1_878
Type: CAZyme
Location: 907020 - 909401 (+)
Type: CAZyme
Location: 907020 - 909401 (+)
Gene ID: HRGMv2_2695_1_879
Type: STP
Location: 909568 - 911217 (-)
Type: STP
Location: 909568 - 911217 (-)
Gene ID: HRGMv2_2695_1_880
Type: TF
Location: 911214 - 911891 (-)
Type: TF
Location: 911214 - 911891 (-)
Gene ID: HRGMv2_2695_1_881
Type: TC
Location: 911938 - 912690 (-)
Type: TC
Location: 911938 - 912690 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp014465955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.