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Cluster: HRGMv2_2693_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2693_6 HRGMv2_2693_6_76 74752 76668 + CBM48 | GH13_9
pfam HRGMv2_2693_6 HRGMv2_2693_6_77 76747 77958 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_2693_6 HRGMv2_2693_6_78 77948 79060 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_2693_6 HRGMv2_2693_6_79 79091 80518 + GT5
TC HRGMv2_2693_6 HRGMv2_2693_6_80 80810 81382 - 3.A.1.26.10
TC HRGMv2_2693_6 HRGMv2_2693_6_81 81640 82302 - 2.A.87.1.3
pfam HRGMv2_2693_6 HRGMv2_2693_6_82 82566 83291 - DNA_alkylation
pfam HRGMv2_2693_6 HRGMv2_2693_6_83 83307 84176 - LicD
CAZyme HRGMv2_2693_6 HRGMv2_2693_6_84 84226 85305 - GT2
Gene ID: HRGMv2_2693_6_76
Type: CAZyme
Location: 74752 - 76668 (+)
Gene ID: HRGMv2_2693_6_77
Type: pfam
Location: 76747 - 77958 (+)
Gene ID: HRGMv2_2693_6_78
Type: pfam
Location: 77948 - 79060 (+)
Gene ID: HRGMv2_2693_6_79
Type: CAZyme
Location: 79091 - 80518 (+)
Gene ID: HRGMv2_2693_6_80
Type: TC
Location: 80810 - 81382 (-)
Gene ID: HRGMv2_2693_6_81
Type: TC
Location: 81640 - 82302 (-)
Gene ID: HRGMv2_2693_6_82
Type: pfam
Location: 82566 - 83291 (-)
Gene ID: HRGMv2_2693_6_83
Type: pfam
Location: 83307 - 84176 (-)
Gene ID: HRGMv2_2693_6_84
Type: CAZyme
Location: 84226 - 85305 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2693_6_76 vegetarian > vegan 1.11747 0.01810
HRGMv2_2693_6_82 vegetarian > vegan 1.34679 0.01810

🧭 Explore Read Mapping of CGC

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