Cluster: HRGMv2_2693_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2693
- CGC Family ID: CGCFAM_02375
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2693_31 | HRGMv2_2693_31_12 | 11503 | 14052 | - | CBM67 | GH78 |
| peptidase | HRGMv2_2693_31 | HRGMv2_2693_31_13 | 14062 | 15261 | - | S12.UPW |
| TC | HRGMv2_2693_31 | HRGMv2_2693_31_14 | 15268 | 16710 | - | 2.A.2.3.2 |
| peptidase | HRGMv2_2693_31 | HRGMv2_2693_31_15 | 16714 | 17697 | - | S09.UPW |
| STP | HRGMv2_2693_31 | HRGMv2_2693_31_16 | 17845 | 18387 | + | TetR_N |
| CAZyme | HRGMv2_2693_31 | HRGMv2_2693_31_17 | 18377 | 20902 | + | GH3 |
Gene ID: HRGMv2_2693_31_12
Type: CAZyme
Location: 11503 - 14052 (-)
Type: CAZyme
Location: 11503 - 14052 (-)
Gene ID: HRGMv2_2693_31_13
Type: peptidase
Location: 14062 - 15261 (-)
Type: peptidase
Location: 14062 - 15261 (-)
Gene ID: HRGMv2_2693_31_14
Type: TC
Location: 15268 - 16710 (-)
Type: TC
Location: 15268 - 16710 (-)
Gene ID: HRGMv2_2693_31_15
Type: peptidase
Location: 16714 - 17697 (-)
Type: peptidase
Location: 16714 - 17697 (-)
Gene ID: HRGMv2_2693_31_16
Type: STP
Location: 17845 - 18387 (+)
Type: STP
Location: 17845 - 18387 (+)
Gene ID: HRGMv2_2693_31_17
Type: CAZyme
Location: 18377 - 20902 (+)
Type: CAZyme
Location: 18377 - 20902 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E bromii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.