Cluster: HRGMv2_2693_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2693
- CGC Family ID: CGCFAM_00587
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2693_19 | HRGMv2_2693_19_29 | 26294 | 27256 | + | GT2 |
| pfam | HRGMv2_2693_19 | HRGMv2_2693_19_30 | 27249 | 28823 | + | Acetyltransf_1 | ATP-grasp | ATP-grasp_3 | CPSase_L_D2 | Dala_Dala_lig_C | FR47 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_9 | ATP-grasp_4 | Acetyltransf_10 |
| pfam | HRGMv2_2693_19 | HRGMv2_2693_19_31 | 28836 | 29204 | + | EamA |
| TC | HRGMv2_2693_19 | HRGMv2_2693_19_32 | 29197 | 29541 | + | 2.A.7.33.5 |
Gene ID: HRGMv2_2693_19_29
Type: CAZyme
Location: 26294 - 27256 (+)
Type: CAZyme
Location: 26294 - 27256 (+)
Gene ID: HRGMv2_2693_19_30
Type: pfam
Location: 27249 - 28823 (+)
Type: pfam
Location: 27249 - 28823 (+)
Gene ID: HRGMv2_2693_19_31
Type: pfam
Location: 28836 - 29204 (+)
Type: pfam
Location: 28836 - 29204 (+)
Gene ID: HRGMv2_2693_19_32
Type: TC
Location: 29197 - 29541 (+)
Type: TC
Location: 29197 - 29541 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E bromii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.