Cluster: HRGMv2_2693_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2693
- CGC Family ID: CGCFAM_04066
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2693_1 | HRGMv2_2693_1_78 | 89727 | 90737 | - | 9.A.11.1.1 |
| pfam | HRGMv2_2693_1 | HRGMv2_2693_1_79 | 90816 | 92528 | - | VanW |
| CAZyme | HRGMv2_2693_1 | HRGMv2_2693_1_80 | 92944 | 94086 | + | GT28 |
Gene ID: HRGMv2_2693_1_78
Type: TC
Location: 89727 - 90737 (-)
Type: TC
Location: 89727 - 90737 (-)
Gene ID: HRGMv2_2693_1_79
Type: pfam
Location: 90816 - 92528 (-)
Type: pfam
Location: 90816 - 92528 (-)
Gene ID: HRGMv2_2693_1_80
Type: CAZyme
Location: 92944 - 94086 (+)
Type: CAZyme
Location: 92944 - 94086 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E bromii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.