Cluster: HRGMv2_2685_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2685
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2685_27 | HRGMv2_2685_27_1 | 2 | 481 | + | 9.B.18.2.1 |
| pfam | HRGMv2_2685_27 | HRGMv2_2685_27_2 | 566 | 1852 | + | Orn_DAP_Arg_deC | Orn_Arg_deC_N |
| NULL(UNKNOWN) | HRGMv2_2685_27 | HRGMv2_2685_27_3 | 1889 | 2287 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2685_27 | HRGMv2_2685_27_4 | 2383 | 3288 | - | 8.A.21.2.2 |
| pfam | HRGMv2_2685_27 | HRGMv2_2685_27_5 | 3304 | 3765 | - | NfeD |
| CAZyme | HRGMv2_2685_27 | HRGMv2_2685_27_6 | 4025 | 5881 | - | GH13_39 |
| CAZyme | HRGMv2_2685_27 | HRGMv2_2685_27_7 | 5956 | 8361 | - | GT35 |
Gene ID: HRGMv2_2685_27_1
Type: TC
Location: 2 - 481 (+)
Type: TC
Location: 2 - 481 (+)
Gene ID: HRGMv2_2685_27_2
Type: pfam
Location: 566 - 1852 (+)
Type: pfam
Location: 566 - 1852 (+)
Gene ID: HRGMv2_2685_27_3
Type:
Location: 1889 - 2287 (+)
Type:
Location: 1889 - 2287 (+)
Gene ID: HRGMv2_2685_27_4
Type: TC
Location: 2383 - 3288 (-)
Type: TC
Location: 2383 - 3288 (-)
Gene ID: HRGMv2_2685_27_5
Type: pfam
Location: 3304 - 3765 (-)
Type: pfam
Location: 3304 - 3765 (-)
Gene ID: HRGMv2_2685_27_6
Type: CAZyme
Location: 4025 - 5881 (-)
Type: CAZyme
Location: 4025 - 5881 (-)
Gene ID: HRGMv2_2685_27_7
Type: CAZyme
Location: 5956 - 8361 (-)
Type: CAZyme
Location: 5956 - 8361 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.