Cluster: HRGMv2_2685_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2685
- CGC Family ID: CGCFAM_00041
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2685_26 | HRGMv2_2685_26_14 | 15538 | 16467 | + | 3.A.1.1.11 |
| TC | HRGMv2_2685_26 | HRGMv2_2685_26_15 | 16478 | 17335 | + | 3.A.1.1.11 |
| TF | HRGMv2_2685_26 | HRGMv2_2685_26_16 | 17419 | 18237 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2685_26 | HRGMv2_2685_26_17 | 18349 | 19905 | + | GH28 |
Gene ID: HRGMv2_2685_26_14
Type: TC
Location: 15538 - 16467 (+)
Type: TC
Location: 15538 - 16467 (+)
Gene ID: HRGMv2_2685_26_15
Type: TC
Location: 16478 - 17335 (+)
Type: TC
Location: 16478 - 17335 (+)
Gene ID: HRGMv2_2685_26_16
Type: TF
Location: 17419 - 18237 (-)
Type: TF
Location: 17419 - 18237 (-)
Gene ID: HRGMv2_2685_26_17
Type: CAZyme
Location: 18349 - 19905 (+)
Type: CAZyme
Location: 18349 - 19905 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.