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Cluster: HRGMv2_2685_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2685_15 HRGMv2_2685_15_1 707 2944 - GH3
CAZyme HRGMv2_2685_15 HRGMv2_2685_15_2 3181 5796 + CBM67 | GH78
pfam HRGMv2_2685_15 HRGMv2_2685_15_3 5905 6753 - AP_endonuc_2
CAZyme HRGMv2_2685_15 HRGMv2_2685_15_4 6757 8571 - CBM32 | GH43_28
CAZyme HRGMv2_2685_15 HRGMv2_2685_15_5 8576 10783 - GH2
pfam HRGMv2_2685_15 HRGMv2_2685_15_6 10865 12355 - MFS_2
CAZyme HRGMv2_2685_15 HRGMv2_2685_15_7 12591 13892 + GH1
STP HRGMv2_2685_15 HRGMv2_2685_15_8 13947 14483 - TetR_N
sulfatase HRGMv2_2685_15 HRGMv2_2685_15_9 14688 15704 + S1_2
TC HRGMv2_2685_15 HRGMv2_2685_15_10 15778 17124 + 2.A.66.1.13
Gene ID: HRGMv2_2685_15_1
Type: CAZyme
Location: 707 - 2944 (-)
Gene ID: HRGMv2_2685_15_2
Type: CAZyme
Location: 3181 - 5796 (+)
Gene ID: HRGMv2_2685_15_3
Type: pfam
Location: 5905 - 6753 (-)
Gene ID: HRGMv2_2685_15_4
Type: CAZyme
Location: 6757 - 8571 (-)
Gene ID: HRGMv2_2685_15_5
Type: CAZyme
Location: 8576 - 10783 (-)
Gene ID: HRGMv2_2685_15_6
Type: pfam
Location: 10865 - 12355 (-)
Gene ID: HRGMv2_2685_15_7
Type: CAZyme
Location: 12591 - 13892 (+)
Gene ID: HRGMv2_2685_15_8
Type: STP
Location: 13947 - 14483 (-)
Gene ID: HRGMv2_2685_15_9
Type: sulfatase
Location: 14688 - 15704 (+)
Gene ID: HRGMv2_2685_15_10
Type: TC
Location: 15778 - 17124 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Faecalibacterium
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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